CDS

Accession Number TCMCG057C15054
gbkey CDS
Protein Id XP_018483499.1
Location join(1601921..1603594,1603596..1604021)
Gene LOC108854435
GeneID 108854435
Organism Raphanus sativus

Protein

Length 699aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018627997.1
Definition PREDICTED: LOW QUALITY PROTEIN: arginine decarboxylase 2-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category E
Description Belongs to the Orn Lys Arg decarboxylase class-II family. SpeA subfamily
KEGG_TC -
KEGG_Module M00133        [VIEW IN KEGG]
KEGG_Reaction R00566        [VIEW IN KEGG]
KEGG_rclass RC00299        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01583        [VIEW IN KEGG]
EC 4.1.1.19        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00330        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
map00330        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006576        [VIEW IN EMBL-EBI]
GO:0006595        [VIEW IN EMBL-EBI]
GO:0006596        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0006979        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008792        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009308        [VIEW IN EMBL-EBI]
GO:0009309        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009445        [VIEW IN EMBL-EBI]
GO:0009446        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009611        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009753        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0016829        [VIEW IN EMBL-EBI]
GO:0016830        [VIEW IN EMBL-EBI]
GO:0016831        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042401        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044106        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080167        [VIEW IN EMBL-EBI]
GO:0097164        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCTGCTTTAGCTTGTGTCGATAGCTACGCCGCCGACGTGTTCATCCCACCGTCACCACCACCACCTTCCTCCACCTCCACCGCCGTCGCCGTCGACGCCTGGAGCCCCTCTCTCTCCTCCTCTCTCTACCGCATCGACGGATGGGGAGCTCCTTACTTTGCCGCTAACTCCTCCGGCAACATCTCCGTTCGTCCTCACGGCTCCAACACTCTCCCTCACCAAGACATCGATCTGTTAAAACTCGTCAAGAAGGTGACCGATCCGAAACAAACCGGCGGTTTGGGGCTCCAGCTTCCGGTTATCATCCGGTTCCCTGACGTTCTGCAGAACCGCCTCGAGTCTCTCCAATCCGCGTTCGATTTCGCGATACAGAGCCAAGGGTACGAGTCTCACTACCAAGGAGTGTACCCCGTGAAATGCAATCAAGACCGGTTCGTCGTGGAGGACATTGTGAGATTCGGTTCTCAATTCCGGTTTGGTTTGGAAGCCGGCTCTAAACCGGAGATCCTCCTCGCTATGAGCTGCTTGTGTAAAGGCGGCAACCCTGAGGAAGCCTTTCTCGTCTGTAACGGCTTCAAAGACGCTGAGTATGTATCTCTAGCTCTTATGGGAAGGAAGCTGGCGTTGAACACTGTGATTGTGCTTGAGCAAGAAGAAGAGCTTGATTTGGTTATAGGCCTGAGTCAGAAGATGAACGTGAGGCCTGTGATTGGGCTGAGAGCTAAGCTGAGGACCAAACACTCTGGTCACTTCGGTTCGACTTCAGGTGAGAAAGGGAAGTTCGGTTTAACTACTTCTCAGATAGTTCGTGTCGTGAGGAAGCTTAGTCAGGCTCGTATGCTTGACTGTCTCCAGCTTTTGCATTTCCACATTGGCTCCCAGATTCCATCCACTTCCTTGTTATCTGATGGTGTCTCCGAAGCTGCTCAGCTTTACTGCGAGCTGGTCCGTCTCGGTGCCAACATGAAAGTTATAGACATCGGTGGTGGCTTGGGGATTGACTACGACGGGTCTAAATCCGGAGAGAGCGATCTCTCCGTTGCCTACACTCTCGAGGAGTATGCTGAAGCTGTTGTAGCCTCTGTTCGGTTTGTATGCGAGAGGAGGTCGGTGAAGCATCCTGTGATATGCAGCGAAAGCGGGAGAGCGATAGTCTCTCATCACTCTGTTTTGATCTTTGAAGCTGTCTCGTCGGTTAAACCGGCTGTTCACGAAGCTGATCCTGATGATATTCGGTTCTTGCTTGAATCCGAGGAAGCTTACGAGGAGCTGTACTCTGCTGTGATGCGTGGGGATCAAGAAAGGTGTTTGCTTTACGTTGAGAAGCTGAAGCAGAGATGCGTTGAAGGTTTTAAAGACGGTGTTGTGAGCGTTGAGCAGTTAGCTTCCGTTGATGGGTTATGCGAATGGGTTTTAAATGCTATTGGCGGGTCGGATCCGGTTCAGACGTACAATATTAACCTCTCGGTTTTCACTTCGGTTCCTGACCTATGGGGGATTGAGCAGCTGTTTCCTATAGTCCCTATTCATAAGCTCGACCAAAGGCCGGGGACACGTGGCGTCTTGTCGGATTTGACGTGTGACAGCGATGGGAAGATTGATAAGTTCATAGGCGGGGAGTCTAGCTTGCCGTTGCATGAGCTAGAGAGCGATGGAGGGAGGTACTTCTTGGGAATGTTTCTTGGAGGGGCGTACGAGGAGGCGCTAGGTGGAGTGCACAACTTGTTTGGTGGGCCGAGTGTTGTACGTGTCTTGCAGAGTGATGGGCCTCATGGCTTTGCTGTGACACGAGCCGTGCCTGGTCAGTCCTCTGCTGATGTTCTTCGTGGGATGCAGCATGAGCCTGAGATGATGTTTCAGACGTTGAAGCACCGAGCAGAGGAGGTTATGCATCATCATACCAAAGGTGGTGAAGAAGAAGATGATGATGATGATGATGAAGCTGAGTTCGGTAATGTCGCGGCTTGTCTTGACCGTTCGTTTCATAACATGCCGTATCTAGCGACCGAGGAGGTGTCTATGAGTAACTCTCTTTCGGCTGCGGTCAGTAACCTTGGCTTTTACTATTGCGATGAAGATGACTACCTCTCTGCATGA
Protein:  
MPALACVDSYAADVFIPPSPPPPSSTSTAVAVDAWSPSLSSSLYRIDGWGAPYFAANSSGNISVRPHGSNTLPHQDIDLLKLVKKVTDPKQTGGLGLQLPVIIRFPDVLQNRLESLQSAFDFAIQSQGYESHYQGVYPVKCNQDRFVVEDIVRFGSQFRFGLEAGSKPEILLAMSCLCKGGNPEEAFLVCNGFKDAEYVSLALMGRKLALNTVIVLEQEEELDLVIGLSQKMNVRPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTSQIVRVVRKLSQARMLDCLQLLHFHIGSQIPSTSLLSDGVSEAAQLYCELVRLGANMKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYAEAVVASVRFVCERRSVKHPVICSESGRAIVSHHSVLIFEAVSSVKPAVHEADPDDIRFLLESEEAYEELYSAVMRGDQERCLLYVEKLKQRCVEGFKDGVVSVEQLASVDGLCEWVLNAIGGSDPVQTYNINLSVFTSVPDLWGIEQLFPIVPIHKLDQRPGTRGVLSDLTCDSDGKIDKFIGGESSLPLHELESDGGRYFLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHGFAVTRAVPGQSSADVLRGMQHEPEMMFQTLKHRAEEVMHHHTKGGEEEDDDDDDEAEFGNVAACLDRSFHNMPYLATEEVSMSNSLSAAVSNLGFYYCDEDDYLSA